Investigating the pathogenicity of missense spliceogenic variants using whole-genome sequencing, RNA-sequencing, and proteomics data from population and clinical research cohorts
This study demonstrates that missense variants can significantly disrupt RNA splicing to cause protein loss-of-function, revealing that a substantial proportion of these clinically relevant "missense spliceogenic variants" are missed by traditional protein-centric prediction tools and highlighting the necessity of integrating RNA-centric analysis into variant interpretation pipelines.